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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3297494_3298187_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3297494 - 3298187

Intron Length:

694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

ATTGCCTTAATC

Flanking Amino Acid:

DCVHVHLNVTRCGLMLTLTT

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

83.1

30.9

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

85.3

0.79

0.7

80.2

25.1

Minor 5ss

35.6

-1.6

47.8

47.9

Minor BPS

77.7

0.85

1.3

80.61

34.3

Associated Gene:

Gene:

OTOP2

Ensembl Gene ID:

ENSAPLG00000005251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005424

3293825 - 3300738

6914