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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3298288_3298418_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3298288 - 3298418

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGACAGAT

5'SS Class:

major

3'SS Sequence:

GCATTTTCAGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TAGCTCTTCATG

Flanking Amino Acid:

HKAHSKLKKNAHLELKVPLT

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.5

0.3

1.2

64.1

35.8

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

59.2

0.21

1.1

61.3

Minor 5ss

34.6

-1.7

3.6

51.2

45.7

Minor BPS

48.5

-0.2

1.8

53.21

42.1

Associated Gene:

Gene:

OTOP2

Ensembl Gene ID:

ENSAPLG00000005251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005424

3293825 - 3300738

6914