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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3298342_3298823_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3298342 - 3298823

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCCATCTGG

5'SS Class:

weak_major

3'SS Sequence:

CCAAATCTGCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

ACGTTTGCAATT

Flanking Amino Acid:

LLKGNLPICEIFKNGYFWLY

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.2

0.1

1.3

42.8

44.3

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

58.7

0.2

1.1

50.1

43.3

Minor 5ss

30.1

-2.3

3.9

38.7

40.7

Minor BPS

43.4

-0.4

40.9

Associated Gene:

Gene:

OTOP2

Ensembl Gene ID:

ENSAPLG00000005251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031700

3294091 - 3300738

6648