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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3299658_3300567_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3299658 - 3300567

Intron Length:

910

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTGAGTACA

5'SS Class:

major

3'SS Sequence:

TTTCCTCAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

ATTTCCTCAAAC

Flanking Amino Acid:

SMFLLLSNIILWIMPAFGAR

Intron Amino Acid Position:

507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

72.2

32.1

Major BPS

73.1

0.58

73.8

32.3

Major PPT

74.1

0.54

0.9

70.6

33.9

Minor 5ss

32.4

-2

2.6

36.4

34.8

Minor BPS

69.5

0.59

1.6

79.01

35.5

Associated Gene:

Gene:

OTOP2

Ensembl Gene ID:

ENSAPLG00000005251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031700

3294091 - 3300738

6648

ENSAPLT00000005424

3293825 - 3300738

6914