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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3310873_3311505_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3310873 - 3311505

Intron Length:

633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCACACTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TCCCTCTTAATT

Flanking Amino Acid:

QLREVEQRLAGNETNLCACP

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

73.2

0.52

0.9

63.1

37.9

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

69.5

0.69

1.2

76.4

40.9

Associated Gene:

Gene:

OTOP3

Ensembl Gene ID:

ENSAPLG00000005532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005708

3306614 - 3313365

6752