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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3312438_3313194_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3312438 - 3313194

Intron Length:

757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CATGCCTCTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TTTTCCTCATGC

Flanking Amino Acid:

SFFLVLCNIILWIMPTFGAH

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

69.3

0.43

0.9

62.5

34.2

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

55.7

0.16

2.1

74.6

42.2

Associated Gene:

Gene:

OTOP3

Ensembl Gene ID:

ENSAPLG00000005532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005708

3306614 - 3313365

6752