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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3317585_3318038_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3317585 - 3318038

Intron Length:

454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACCAT

5'SS Class:

major

3'SS Sequence:

CTTTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAA

U12 Branch Point Sequence:

AAAGAATAAAGT

Flanking Amino Acid:

RTYMWGVIYLRNVDPPIWYD

Intron Amino Acid Position:

784

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

71.2

40.6

Major BPS

53.1

0.08

1.2

56.3

37.2

Major PPT

88.6

0.87

0.7

80.8

31.2

Minor 5ss

38.9

-1.2

3.3

55.8

48.4

Minor BPS

37.7

-0.8

2.1

50.63

42.7

Associated Gene:

Gene:

HID1

Ensembl Gene ID:

ENSAPLG00000005782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038311

3317521 - 3343001

25481

ENSAPLT00000005997

3317521 - 3337384

19864