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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3318198_3318574_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3318198 - 3318574

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

CTGTCTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

TGGCACTTACAT

Flanking Amino Acid:

VPQVEKICIDKGLTDESEIL

Intron Amino Acid Position:

731

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

72.8

35.1

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

80.9

0.7

0.8

76.8

31.9

Minor 5ss

35.6

-1.6

3.5

49.9

40.8

Minor BPS

47.4

-0.1

1.9

64.84

44.7

Associated Gene:

Gene:

HID1

Ensembl Gene ID:

ENSAPLG00000005782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038311

3317521 - 3343001

25481

ENSAPLT00000005997

3317521 - 3337384

19864