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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3319165_3322286_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3319165 - 3322286

Intron Length:

3122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

AATTTATTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTAATTTATTT

Flanking Amino Acid:

AVSDGEPWSGEVSHPRRDRR

Intron Amino Acid Position:

674

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

72.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.7

0.6

0.9

70.4

39.4

Minor 5ss

32.1

-2

32.8

41.8

Minor BPS

55.6

0.26

1.8

77.46

39.3

Associated Gene:

Gene:

HID1

Ensembl Gene ID:

ENSAPLG00000005782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038311

3317521 - 3343001

25481

ENSAPLT00000005997

3317521 - 3337384

19864