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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3322421_3322895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3322421 - 3322895

Intron Length:

475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCTTT

5'SS Class:

major

3'SS Sequence:

GTTTTGAACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTGTTTTGAACA

Flanking Amino Acid:

TLKTSLVATPGIDKLTEKSQ

Intron Amino Acid Position:

629

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.3

78.8

38.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

68.7

0.42

62.4

42.4

Minor 5ss

45.2

-0.5

65.1

46.2

Minor BPS

61.9

0.37

1.4

68.35

38.1

Associated Gene:

Gene:

HID1

Ensembl Gene ID:

ENSAPLG00000005782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038311

3317521 - 3343001

25481

ENSAPLT00000005997

3317521 - 3337384

19864