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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3323124_3324296_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3323124 - 3324296

Intron Length:

1173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTGATTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TCCTCCTCTACT

Flanking Amino Acid:

FNNIIQYQFDGNSNLVYAVI

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.9

31.6

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

0.47

61.7

43.6

Minor 5ss

33.9

-1.8

2.9

40.8

39.5

Minor BPS

59.1

0.37

1.9

76.38

Associated Gene:

Gene:

HID1

Ensembl Gene ID:

ENSAPLG00000005782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038311

3317521 - 3343001

25481

ENSAPLT00000005997

3317521 - 3337384

19864