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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3325182_3326432_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3325182 - 3326432

Intron Length:

1251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTCAGTATA

5'SS Class:

major

3'SS Sequence:

TTCCTTGCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

TGCTCAAGAACC

Flanking Amino Acid:

TGTHADLLIIVFHKIITSGH

Intron Amino Acid Position:

472

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.3

73.5

37.2

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

72.9

0.52

0.8

69.1

31.5

Minor 5ss

36.6

-1.5

2.8

44.9

37.6

Minor BPS

47.6

-0.2

62.77

41.8

Associated Gene:

Gene:

HID1

Ensembl Gene ID:

ENSAPLG00000005782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038311

3317521 - 3343001

25481

ENSAPLT00000005997

3317521 - 3337384

19864