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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3326585_3327217_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3326585 - 3327217

Intron Length:

633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

TCTTCCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTTTTATTA

Flanking Amino Acid:

YFLNDARADQSRVGLMHIGV

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

62.6

44.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.2

0.81

0.7

24.1

Minor 5ss

41.6

-0.9

2.8

50.1

46.1

Minor BPS

0.37

1.5

71.06

35.7

Associated Gene:

Gene:

HID1

Ensembl Gene ID:

ENSAPLG00000005782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038311

3317521 - 3343001

25481

ENSAPLT00000005997

3317521 - 3337384

19864