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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3327309_3327720_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3327309 - 3327720

Intron Length:

412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGATC

5'SS Class:

major

3'SS Sequence:

TATCTCCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ATCTTTATAATT

Flanking Amino Acid:

LFWKLCDFNKKFLFFVLKSS

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

73.2

37.9

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

82.8

0.74

0.8

73.9

36.4

Minor 5ss

30.3

-2.3

3.4

42.1

44.9

Minor BPS

58.8

0.35

1.5

74.24

37.2

Associated Gene:

Gene:

HID1

Ensembl Gene ID:

ENSAPLG00000005782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038311

3317521 - 3343001

25481

ENSAPLT00000005997

3317521 - 3337384

19864