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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3327862_3327957_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3327862 - 3327957

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGTGC

5'SS Class:

major

3'SS Sequence:

GGTCTGTCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

TGGTCTGTCAGC

Flanking Amino Acid:

NYLSRIHREEDFQFILKGVA

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

64.8

42.3

Major BPS

0.3

34.1

Major PPT

64.9

0.34

41.8

Minor 5ss

42.6

-0.8

3.2

59.3

45.5

Minor BPS

41.4

-0.6

2.5

53.95

44.5

Associated Gene:

Gene:

HID1

Ensembl Gene ID:

ENSAPLG00000005782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038311

3317521 - 3343001

25481

ENSAPLT00000005997

3317521 - 3337384

19864