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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3328015_3328416_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3328015 - 3328416

Intron Length:

402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

TCTTTGAACACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TGTCTTTGAACA

Flanking Amino Acid:

TTGTAMDDVDPPGPDNLFVN

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

70.4

35.5

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

71.3

0.48

65.7

38.9

Minor 5ss

-2.4

3.2

35.6

41.4

Minor BPS

61.1

0.34

1.4

70.24

35.4

Associated Gene:

Gene:

HID1

Ensembl Gene ID:

ENSAPLG00000005782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038311

3317521 - 3343001

25481

ENSAPLT00000005997

3317521 - 3337384

19864