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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3328640_3329148_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3328640 - 3329148

Intron Length:

509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

CCTTCTGAGAAT

Flanking Amino Acid:

WVQFFCSTENRHALPLFTSL

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

38.2

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

75.5

0.57

0.9

68.8

37.1

Minor 5ss

27.4

-2.6

3.5

36.8

47.7

Minor BPS

41.5

-0.5

2.3

58.91

45.1

Associated Gene:

Gene:

HID1

Ensembl Gene ID:

ENSAPLG00000005782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038311

3317521 - 3343001

25481

ENSAPLT00000005997

3317521 - 3337384

19864