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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3329266_3329763_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3329266 - 3329763

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAA

U12 Branch Point Sequence:

AGCTCCAGGATT

Flanking Amino Acid:

PQPNYIHDLNRTELLKLLLT

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

38.2

Major BPS

69.6

0.49

59.5

Major PPT

85.8

0.81

0.7

83.8

24.3

Minor 5ss

28.6

-2.5

3.5

36.8

47.7

Minor BPS

47.6

-0.1

1.8

63.92

40.3

Associated Gene:

Gene:

HID1

Ensembl Gene ID:

ENSAPLG00000005782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038311

3317521 - 3343001

25481

ENSAPLT00000005997

3317521 - 3337384

19864