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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3329871_3332512_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3329871 - 3332512

Intron Length:

2642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

GTGCTCTGACCT

Flanking Amino Acid:

TVQSHRRSTVDTAEDIHSID

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

72.8

34.4

Major BPS

69.1

0.47

60.7

37.6

Major PPT

81.2

0.7

75.9

26.2

Minor 5ss

34.3

-1.8

2.8

37.6

42.2

Minor BPS

48.9

-0

1.8

66.75

43.6

Associated Gene:

Gene:

HID1

Ensembl Gene ID:

ENSAPLG00000005782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038311

3317521 - 3343001

25481

ENSAPLT00000005997

3317521 - 3337384

19864