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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3332627_3335298_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3332627 - 3335298

Intron Length:

2672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTCTGTCTC

5'SS Class:

major

3'SS Sequence:

TTCTCACTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CCTTCCACAATT

Flanking Amino Acid:

STVPGAGRGGGDDDDENARP

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.1

0.31

1.4

59.7

45.2

Major BPS

0.87

0.8

85.6

Major PPT

84.4

0.77

0.7

81.6

29.1

Minor 5ss

39.8

-1.1

2.8

45.4

42.6

Minor BPS

54.5

0.22

1.9

72.93

44.2

Associated Gene:

Gene:

HID1

Ensembl Gene ID:

ENSAPLG00000005782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005997

3317521 - 3337384

19864

ENSAPLT00000038311

3317521 - 3343001

25481