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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3337295_3342935_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3337295 - 3342935

Intron Length:

5641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

CCTCTGTTAACC

Flanking Amino Acid:

AVIQLTTKTQPVEATDDAFW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

78.6

0.64

0.8

73.3

31.6

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

51.1

0.01

2.1

62.68

43.2

Associated Gene:

Gene:

HID1

Ensembl Gene ID:

ENSAPLG00000005782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038311

3317521 - 3343001

25481