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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3380028_3380355_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3380028 - 3380355

Intron Length:

328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TGCTGTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAGCAT

U12 Branch Point Sequence:

TGTTCCCCACGT

Flanking Amino Acid:

AKIDAQEQEAAKNTAEYVQA

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

49.2

-0

1.5

59.7

46.7

Major PPT

76.3

0.59

0.9

69.6

36.8

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

44.6

-0.3

2.3

69.84

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006404

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037228

3379699 - 3382767

3069

ENSAPLT00000006638

3379699 - 3382828

3130