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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3380428_3381807_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3380428 - 3381807

Intron Length:

1380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCAATTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TCTCCTCCAATT

Flanking Amino Acid:

EDPQRRAVSTFSALKVPEPV

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

81.6

0.78

0.8

24.9

Major PPT

75.7

0.58

0.9

68.2

36.2

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

0.01

1.9

70.25

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006404

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037228

3379699 - 3382767

3069