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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3412870_3412975_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3412870 - 3412975

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGTTT

5'SS Class:

major

3'SS Sequence:

TTCTCCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAC

U12 Branch Point Sequence:

CCCTCCTTCACG

Flanking Amino Acid:

VTEFQVTDSSEAKEQVLANL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.1

79.5

36.8

Major BPS

65.1

0.38

1.1

68.9

36.5

Major PPT

86.3

0.82

0.7

80.9

24.2

Minor 5ss

48.2

-0.2

3.2

73.2

43.7

Minor BPS

57.5

0.09

1.9

58.36

49.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007037

3412803 - 3414395

1593