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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3450258_3450348_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3450258 - 3450348

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGGGGA

5'SS Class:

major

3'SS Sequence:

CCCCCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CTCTCCCTGACG

Flanking Amino Acid:

EEVDVEPPLVVVPGADPASR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

61.9

38.6

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

70.5

0.46

0.7

64.4

Minor 5ss

23.3

-3.1

3.2

25.7

39.3

Minor BPS

57.7

0.1

1.8

63.31

44.8

Associated Gene:

Gene:

NUP85

Ensembl Gene ID:

ENSAPLG00000007065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044360

3450225 - 3461662

11438

ENSAPLT00000007378

3450225 - 3461662

11438