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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3450443_3450529_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3450443 - 3450529

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTCCC

5'SS Class:

major

3'SS Sequence:

TCCGACCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TGAGCCCTGACG

Flanking Amino Acid:

LVCETRFDRGGGGDAAPGSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

65.8

40.2

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

0.52

0.9

65.3

35.9

Minor 5ss

28.6

-2.4

35.8

Minor BPS

49.4

-0.1

1.9

57.18

Associated Gene:

Gene:

NUP85

Ensembl Gene ID:

ENSAPLG00000007065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044360

3450225 - 3461662

11438

ENSAPLT00000007378

3450225 - 3461662

11438