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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3450693_3451030_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3450693 - 3451030

Intron Length:

338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TTGTGTTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

GCTCTCTAAACG

Flanking Amino Acid:

EELAGKSRKAQLVQVSKNYR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

57.2

42.1

Major BPS

0.57

73.6

28.6

Major PPT

75.8

0.58

1.1

72.9

42.2

Minor 5ss

28.8

-2.4

3.1

36.7

41.6

Minor BPS

52.3

-0

1.8

56.89

44.6

Associated Gene:

Gene:

NUP85

Ensembl Gene ID:

ENSAPLG00000007065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007378

3450225 - 3461662

11438

ENSAPLT00000044360

3450225 - 3461662

11438