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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3451102_3451582_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3451102 - 3451582

Intron Length:

481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGCTTTTTAATT

Flanking Amino Acid:

ACMEDMHRAAAATRDPALHS

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

80.5

34.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.8

0.76

0.7

82.1

29.1

Minor 5ss

-0.7

2.8

55.1

43.4

Minor BPS

72.1

0.77

1.1

79.54

37.3

Associated Gene:

Gene:

NUP85

Ensembl Gene ID:

ENSAPLG00000007065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044360

3450225 - 3461662

11438

ENSAPLT00000007378

3450225 - 3461662

11438