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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3451627_3452089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3451627 - 3452089

Intron Length:

463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCTTC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TAAATCTGAAAC

Flanking Amino Acid:

PALHSQYSTQVSILSAMELI

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

75.1

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

85.8

0.81

0.7

83.7

24.5

Minor 5ss

48.5

-0.1

2.8

43.2

Minor BPS

50.3

-0

1.6

59.76

38.1

Associated Gene:

Gene:

NUP85

Ensembl Gene ID:

ENSAPLG00000007065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044360

3450225 - 3461662

11438

ENSAPLT00000007378

3450225 - 3461662

11438