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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3452160_3453089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3452160 - 3453089

Intron Length:

930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTGTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

AGAATGATAACC

Flanking Amino Acid:

CEILFVEAAAAGPLLLRLLD

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

0.45

0.9

67.6

25.3

Major PPT

65.4

0.35

1.1

66.1

38.9

Minor 5ss

35.7

-1.6

48.8

Minor BPS

42.6

-0.5

2.2

52.09

38.3

Associated Gene:

Gene:

NUP85

Ensembl Gene ID:

ENSAPLG00000007065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044360

3450225 - 3461662

11438

ENSAPLT00000007378

3450225 - 3461662

11438