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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3453713_3454295_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3453713 - 3454295

Intron Length:

583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTATGTATG

5'SS Class:

major

3'SS Sequence:

ACCTTGGGTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTGCCTTTATTT

Flanking Amino Acid:

DLMKKMPVPNLGNTQTLTEL

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

76.5

38.6

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

64.7

0.33

1.1

44.1

Minor 5ss

47.9

-0.2

2.5

64.1

40.5

Minor BPS

61.9

0.45

1.6

76.92

40.3

Associated Gene:

Gene:

NUP85

Ensembl Gene ID:

ENSAPLG00000007065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044360

3450225 - 3461662

11438

ENSAPLT00000007378

3450225 - 3461662

11438