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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3454419_3454783_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3454419 - 3454783

Intron Length:

365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTTATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

ATTTTCAGAATT

Flanking Amino Acid:

SNPHMESICKILGGDENAIL

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

0.65

1.5

85.7

34.9

Major PPT

79.8

0.67

0.8

81.3

29.1

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

59.1

0.36

1.7

80.09

35.4

Associated Gene:

Gene:

NUP85

Ensembl Gene ID:

ENSAPLG00000007065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044360

3450225 - 3461662

11438

ENSAPLT00000007378

3450225 - 3461662

11438