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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3455421_3455537_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3455421 - 3455537

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGAGTTC

5'SS Class:

weak_major

3'SS Sequence:

GTTTCAAATACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTTCTTTATTT

Flanking Amino Acid:

FELHQVIKECSIALSNWWFV

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.8

0.23

1.2

59.3

40.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

70.7

0.47

63.5

41.1

Minor 5ss

35.6

-1.6

3.6

46.7

Minor BPS

76.2

0.9

1.4

91.47

32.2

Associated Gene:

Gene:

NUP85

Ensembl Gene ID:

ENSAPLG00000007065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044360

3450225 - 3461662

11438

ENSAPLT00000007378

3450225 - 3461662

11438