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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3455622_3456248_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3455622 - 3456248

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCACTCCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

TGTTTCTTCACT

Flanking Amino Acid:

HCKLLQSHNLYFGSNMREFL

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

77.5

0.68

79.6

Major PPT

76.3

0.59

0.8

69.9

30.7

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

72.3

0.78

1.7

88.23

36.9

Associated Gene:

Gene:

NUP85

Ensembl Gene ID:

ENSAPLG00000007065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044360

3450225 - 3461662

11438

ENSAPLT00000007378

3450225 - 3461662

11438