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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3456923_3457010_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3456923 - 3457010

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATTGAT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCTCCTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TTCTCTCTGATG

Flanking Amino Acid:

ICEQRHMQEQVRSICKIMAM

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

79.4

28.6

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

67.9

0.4

71.7

33.2

Minor 5ss

-2.4

3.2

40.2

45.9

Minor BPS

53.8

-0

1.7

62.62

40.1

Associated Gene:

Gene:

NUP85

Ensembl Gene ID:

ENSAPLG00000007065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044360

3450225 - 3461662

11438

ENSAPLT00000007378

3450225 - 3461662

11438