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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3457129_3458330_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3457129 - 3458330

Intron Length:

1202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ACTTTCTCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TAAGCCTTTATT

Flanking Amino Acid:

DAAFATLISDRFLKDYCERG

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

79.7

30.2

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

73.9

0.54

0.8

66.5

Minor 5ss

30.1

-2.3

2.6

41.5

Minor BPS

59.2

0.37

1.7

73.78

43.3

Associated Gene:

Gene:

NUP85

Ensembl Gene ID:

ENSAPLG00000007065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044360

3450225 - 3461662

11438

ENSAPLT00000007378

3450225 - 3461662

11438