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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3465837_3466561_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3465837 - 3466561

Intron Length:

725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTCCAC

U12 Branch Point Sequence:

TACTCCCTGAGG

Flanking Amino Acid:

NIVLQAAVPKSMKVKLQPPS

Intron Amino Acid Position:

682

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.4

43.3

Major BPS

49.8

-0

1.4

64.2

Major PPT

0.81

0.8

80.6

Minor 5ss

34.5

-1.8

3.5

47.3

48.3

Minor BPS

48.1

-0.2

2.1

56.22

45.1

Associated Gene:

Gene:

GGA3

Ensembl Gene ID:

ENSAPLG00000007358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007673

3464382 - 3483323

18942