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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3466732_3466892_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3466732 - 3466892

Intron Length:

161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAC

U12 Branch Point Sequence:

TACACCTGCATT

Flanking Amino Acid:

VHVPLESIKPSSALPVTAYD

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

79.9

32.8

Major BPS

60.5

0.26

1.1

70.3

34.5

Major PPT

71.4

0.48

68.1

37.5

Minor 5ss

40.2

-1.1

2.8

54.6

37.1

Minor BPS

48.2

-0

1.9

66.75

43.9

Associated Gene:

Gene:

GGA3

Ensembl Gene ID:

ENSAPLG00000007358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007673

3464382 - 3483323

18942