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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3474554_3475527_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3474554 - 3475527

Intron Length:

974

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTCCAT

U12 Branch Point Sequence:

TGCACTGCAAGT

Flanking Amino Acid:

KDAYYMLKRQGIVMFDPVIP

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.5

40.6

Major BPS

53.3

0.08

1.4

64.2

Major PPT

83.7

0.76

0.8

80.6

31.5

Minor 5ss

33.8

-1.8

3.3

46.8

Minor BPS

40.3

-0.6

2.3

57.11

45.6

Associated Gene:

Gene:

GGA3

Ensembl Gene ID:

ENSAPLG00000007358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007673

3464382 - 3483323

18942