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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3588474_3589103_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3588474 - 3589103

Intron Length:

630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

TTCTTTTCCATT

Flanking Amino Acid:

VLKTPIIDNVRWCLEMALSR

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.8

38.7

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

86.2

0.81

0.7

84.1

30.5

Minor 5ss

32.4

-2

40.4

45.7

Minor BPS

48.5

-0

1.9

70.72

41.5

Associated Gene:

Gene:

TMEM94

Ensembl Gene ID:

ENSAPLG00000008675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040148

3573204 - 3613373

40170

ENSAPLT00000009065

3573204 - 3613373

40170