Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_3601373_3602490_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3601373 - 3602490

Intron Length:

1118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCAGC

5'SS Class:

major

3'SS Sequence:

CTCTTCCACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TTTCTGCTAACT

Flanking Amino Acid:

TDIYPLSGSDRKKVLDFYQR

Intron Amino Acid Position:

732

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

63.1

43.4

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

69.8

0.45

0.8

65.3

29.5

Minor 5ss

32.9

-2

3.1

42.5

44.6

Minor BPS

51.8

0.14

2.3

81.84

39.4

Associated Gene:

Gene:

TMEM94

Ensembl Gene ID:

ENSAPLG00000008675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040148

3573204 - 3613373

40170

ENSAPLT00000009065

3573204 - 3613373

40170