Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_3604439_3605066_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3604439 - 3605066

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGAGAA

5'SS Class:

major

3'SS Sequence:

CTCTGTGCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTGTGCTTATTG

Flanking Amino Acid:

AGSLHDDLHQVSRDDVEGLL

Intron Amino Acid Position:

912

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

67.4

33.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

74.2

0.54

0.9

64.9

41.3

Minor 5ss

23.9

-3

20.8

37.5

Minor BPS

-0

2.1

62.69

45.8

Associated Gene:

Gene:

TMEM94

Ensembl Gene ID:

ENSAPLG00000008675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040148

3573204 - 3613373

40170

ENSAPLT00000009065

3573204 - 3613373

40170