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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3608297_3608838_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3608297 - 3608838

Intron Length:

542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCAG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

AGGGCTCTGAGG

Flanking Amino Acid:

STSIIRLIEQARHATYGIRK

Intron Amino Acid Position:

1084

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

64.9

42.8

Major BPS

59.9

0.25

1.3

70.1

Major PPT

82.1

0.72

0.8

73.3

37.2

Minor 5ss

31.8

-2.1

37.6

47.1

Minor BPS

39.3

-0.9

1.9

37.45

39.3

Associated Gene:

Gene:

TMEM94

Ensembl Gene ID:

ENSAPLG00000008675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040148

3573204 - 3613373

40170

ENSAPLT00000009065

3573204 - 3613373

40170