Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_3610927_3611818_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3610927 - 3611818

Intron Length:

892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTACCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

TGCTCAGTAACC

Flanking Amino Acid:

LTAGLIVLHTVFISITHVHR

Intron Amino Acid Position:

1249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.8

38.7

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

72.9

0.52

0.9

66.4

34.6

Minor 5ss

32.4

-2

40.4

45.7

Minor BPS

0.01

2.3

68.26

Associated Gene:

Gene:

TMEM94

Ensembl Gene ID:

ENSAPLG00000008675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040148

3573204 - 3613373

40170

ENSAPLT00000009065

3573204 - 3613373

40170