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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3619458_3619604_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3619458 - 3619604

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGGGA

5'SS Class:

major

3'SS Sequence:

TCTTCCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

CGTGCCACGAGG

Flanking Amino Acid:

GTAVVRTPAPDVPTKHTSVA

Intron Amino Acid Position:

1348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

57.5

41.7

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

86.6

0.82

0.7

24.1

Minor 5ss

26.9

-2.7

3.7

38.1

46.8

Minor BPS

38.2

-1

2.1

40.32

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037157

3618879 - 3646962

28084

ENSAPLT00000034453

3618003 - 3646962

28960