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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3622212_3622426_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3622212 - 3622426

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

ATGCTCTTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TTGCTGCTCACG

Flanking Amino Acid:

IAEWLPNYIPADLMDWLSAI

Intron Amino Acid Position:

582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.2

39.6

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

75.1

0.57

0.9

69.4

36.1

Minor 5ss

30.5

-2.2

2.8

37.9

39.5

Minor BPS

38.2

-1

2.5

48.62

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037157

3618879 - 3646962

28084

ENSAPLT00000034453

3618003 - 3646962

28960