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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3622529_3622634_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3622529 - 3622634

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTGCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TCTGCTTGCATT

Flanking Amino Acid:

VPTISRMTPEDLTAIGVTKP

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

66.3

0.4

1.1

41.8

Major PPT

63.6

0.31

38.3

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

47.5

-0.1

67.73

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037157

3618879 - 3646962

28084

ENSAPLT00000034453

3618003 - 3646962

28960