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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3623055_3623169_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3623055 - 3623169

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

CCCCCTGTGACA

Flanking Amino Acid:

PRNGQLTSTAGPPGHQTPGN

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

78.2

31.2

Major BPS

0.22

1.2

52.4

43.3

Major PPT

74.6

0.55

0.9

68.7

37.2

Minor 5ss

25.4

-2.8

3.5

36.8

47.7

Minor BPS

45.1

-0.3

50.7

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037157

3618879 - 3646962

28084

ENSAPLT00000034453

3618003 - 3646962

28960