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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3627119_3627230_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3627119 - 3627230

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CCCTGCTGAGCC

Flanking Amino Acid:

QATVDIKDSNGMRPLHYAAW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

68.2

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

78.7

0.65

0.8

73.3

31.7

Minor 5ss

31.4

-2.1

3.7

47.2

48.2

Minor BPS

43.8

-0.4

2.1

50.45

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037157

3618879 - 3646962

28084

ENSAPLT00000034453

3618003 - 3646962

28960