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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3696817_3696949_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3696817 - 3696949

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGCCCATG

5'SS Class:

weak_major

3'SS Sequence:

TCCCCGCAGCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

ACCCCCTCAGCG

Flanking Amino Acid:

SPVPGAASRLAELPEARGRS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.3

0.13

1.2

52.5

45.9

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

44.3

-0.3

1.7

42.3

37.7

Minor 5ss

42.2

-0.9

3.1

53.8

45.5

Minor BPS

-0.4

1.9

47.58

45.3

Associated Gene:

Gene:

TSEN54

Ensembl Gene ID:

ENSAPLG00000009419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021911

3696691 - 3704924

8234